conkit.io.alphafold module¶

Parser module specific to AF2 distance predictions

class AlphaFold2Parser[source]¶

Bases: conkit.io._parser.BinaryDistanceFileParser

Parser class for AF2 distance prediction file

read(f_handle, f_id='alphafold2')[source]¶

Read a distance prediction file

Parameters:	f_handle – Open file handle [read permissions] f_id (str, optional) – Unique contact file identifier
Returns:
Return type:	`DistanceFile`

write(f_handle, hierarchy)[source]¶

Write a distance file instance to a file

Raises:	`NotImplementedError` – Write function not available