conkit.io.alphafold module¶
Parser module specific to AF2 distance predictions
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class
AlphaFold2Parser
[source]¶ Bases:
conkit.io._parser.BinaryDistanceFileParser
Parser class for AF2 distance prediction file
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read
(f_handle, f_id='alphafold2')[source]¶ Read a distance prediction file
Parameters: - f_handle – Open file handle [read permissions]
- f_id (str, optional) – Unique contact file identifier
Returns: Return type:
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write
(f_handle, hierarchy)[source]¶ Write a distance file instance to a file
Raises: NotImplementedError
– Write function not available
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