conkit.core.distancefile module¶

Distance prediction file container used throughout ConKit

class DistanceFile(id)[source]¶

Bases: conkit.core.contactfile.ContactFile

A distance file object representing a single distance prediction file. This class inherits methods and attributes from ContactFile

Examples

>>> from conkit.core import Distogram, DistanceFile
>>> distance_file = DistanceFile("example")
>>> distance_file.add(Distogram("foo"))
>>> distance_file.add(Distogram("bar"))
>>> print(distance_file)
DistanceFile(id="example" ndistograms=2)

author¶

The author of the ContactFile

Type:	str

method¶

The ContactFile-specific method

Type:	list, str

remark¶

The ContactFile-specific remarks

Type:	list, str

target¶

The target name

Type:	str

top_map¶

The first ContactMap entry in ContactFile

Type:	`ContactMap`

original_file_format¶

The original file format used to create the Distogram instance

Type:	str

add(entity)[source]¶

Add a child to the Entity

Parameters:	entity (`Entity`) –

author

original_file_format: The original file format used to create the DistanceFile instance

target