ConKit Usage Examples

Note

Please download the example data here. This data will be used throughout all examples.

File Conversions
  • (Multiple) Sequence File
 Script Python
  • Contact prediction
 Script Python
Data Analysis
  • Multiple Sequence Alignment
 Script Python
  • Contact prediction
   Python
Data Visualisation
  • Contact Map
 Script Python
  • Contact Map Chord Diagram
 Script Python
  • Contact Density Plot
 Script Python
  • Precision Evaluation
 Script Python
  • Sequence Coverage
 Script Python
ConKit Data Model
  • (Multiple) Sequence File
   Python
  • Contact prediction
   Python
Application Wrappers
  • Prediction Pipeline
 Script Python