Distogram PlottingΒΆ
If you would like to plot a distogram using ConKit without the overhead of using Python, you can simply use the conkit-plot
script.
$> conkit-plot distheat -o 7l6q/7l6q.png 7l6q/7l6q.fasta fasta 7l6q/7l6q.af2 alphafold2
The call above uses the AlphaFold 2 distance prediction file 7l6q.af2
file, which is in alphafold2
format, and plots the following distogram stored in the file 7l6q/7l6q.png