conkit.io.mapalign module¶

Parser module specific to map_align map files

class MapAlignParser[source]¶

Bases: conkit.io._parser.ContactFileParser

Class to parse a map_align map file

read(f_handle, f_id='map_align')[source]¶

Read a contact file

Parameters:	f_handle – Open file handle [read permissions] f_id (str, optional) – Unique contact file identifier
Returns:
Return type:	`ContactFile`

write(f_handle, hierarchy)[source]¶

Write a contact file instance to a file

Parameters:	f_handle – Open file handle [write permissions] hierarchy (`ContactFile`, `ContactMap`) – or `Contact`
Raises:	`RuntimeError` – More than one contact map in the hierarchy