conkit.io.gremlin module

Parser module specific to Gremlin predictions

class GremlinParser[source]

Bases: conkit.io._parser.ContactFileParser

Parser class for GREMLIN contact prediction file

read(f_handle, f_id='gremlin')[source]

Read a contact file

Parameters:
  • f_handle – Open file handle [read permissions]
  • f_id (str, optional) – Unique contact file identifier
Returns:
Return type:

ContactFile
write(f_handle, hierarchy)[source]

Write a contact file instance to to file

Parameters: