conkit.io.a2m module

Parser module specific to HH-suite A2M sequence files

class A2mParser[source]

Bases: conkit.io._parser.SequenceFileParser

Parser class for A2M sequence files

read(f_handle, f_id='a2m')[source]

Read a sequence file

Parameters:
  • f_handle – Open file handle [read permissions]
  • f_id (str, optional) – Unique sequence file identifier
Returns:
Return type:

SequenceFile
write(f_handle, hierarchy)[source]

Write a sequence file instance to to file

Parameters: