Source code for conkit.misc

# BSD 3-Clause License
#
# Copyright (c) 2016-18, University of Liverpool
# All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions are met:
#
# * Redistributions of source code must retain the above copyright notice, this
#   list of conditions and the following disclaimer.
#
# * Redistributions in binary form must reproduce the above copyright notice,
#   this list of conditions and the following disclaimer in the documentation
#   and/or other materials provided with the distribution.
#
# * Neither the name of the copyright holder nor the names of its
#   contributors may be used to endorse or promote products derived from
#   this software without specific prior written permission.
#
# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
# DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
# FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
# DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
# SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
# CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
# OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
"""Various miscellaneous code required by ConKit"""

__author__ = "Felix Simkovic"
__date__ = "03 Aug 2016"
__version__ = "1.0"

import numpy as np


[docs]def normalize(data, vmin=0, vmax=1): """Apply a Feature scaling algorithm to normalize the data This normalization will bring all values into the range [0, 1]. This function allows range restrictions by values ``vmin`` and ``vmax``. .. math:: {X}'=\\frac{(X-X_{min})(vmax-vmin)}{X_{max}-X_{min}} Parameters ---------- data : list, tuple The data to normalize vmin : int, float, optional The minimum value vmax : int, float, optional The maximum value Returns ------- list The normalized data """ data = np.array(data, dtype=np.float64) return (vmin + (data - data.min()) * (vmax - vmin) / (data.max() - data.min())).tolist()