ConKit Usage Examples

Note

Please download the example data here. This data will be used throughout all examples.

File Conversions
  • (Multiple) Sequence File

Script

Python
  • Contact prediction

Script

Python
Data Analysis
  • Multiple Sequence Alignment

Script

Python
  • Contact prediction
  

Python
Data Visualisation
  • Contact Map

Script

Python
  • Contact Map Matrix

Script

Python
  • Contact Map Chord Diagram

Script

Python
  • Contact Density Plot

Script

Python
  • Precision Evaluation

Script

Python
  • Sequence Coverage

Script

Python
Data Model
  • (Multiple) Sequence File
  

Python
  • Contact Prediction File
  

Python
Application Wrappers
  • Prediction Pipeline

Script

Python