conkit.io.ncont module¶
Parser module specific to ncont contact comparison
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class
NcontParser
[source]¶ Bases:
conkit.io._parser.ContactFileParser
Class to parse a Ncont contact file.
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read
(f_handle, f_id='ncont')[source]¶ Read a contact file
Parameters: - f_handle – Open file handle [read permissions]
- f_id (str, optional) – Unique contact file identifier
Returns: Return type:
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write
(f_handle, hierarchy)[source]¶ Write a contact file instance to to file
Parameters: - f_handle – Open file handle [write permissions]
- hierarchy (
ContactFile
,ContactMap
) – orContact
Note
Creating a
write()
function would come with a lot of issues, such as the parallel/antiparallel direction, scoring etc … thus, this method is unavailable.Raises: NotImplementedError
– Write function not available
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